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addgene pls scel  (Addgene inc)


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    Structured Review

    Addgene inc addgene pls scel
    Addgene Pls Scel, supplied by Addgene inc, used in various techniques. Bioz Stars score: 95/100, based on 50 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/plasmid+addgene/pLS-SceI+(Plasmid+%23137725)/pmc13657374-119-6-6
    Average 95 stars, based on 50 article reviews
    addgene pls scel - by Bioz Stars, 2026-10
    95/100 stars

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    Related Articles

    Sequencing:

    Article Title: Non-canonical cytokinesis driven by mechanical uncoupling via nematic flows and adhesion-based invagination
    Article Snippet: .. To synthesize messenger RNA (mRNA) for the active RhoA sensor mNeonGreen-2xrGBD , the coding sequence was amplified from the plasmid Addgene#129624 with the primers: Fwd 5’-tttgcaggatcccatcgattgccaccATGGTGAGCAAGGGCGAGGA-3’ and Rev 5’-gtaatacgactcactatagttgattatgatcagTTATCTAGAG-3’ and the PCR product was inserted into a pCS2plus plasmid linearized by restriction enzymes BstBI and XbaI using Gibson Assembly Cloning Kit (New England Biolabs) following the manufacturer instructions. ..

    Article Title: Functional deletion of α7 nicotinic acetylcholine receptor impairs Ca 2+ -dependent glutamatergic synaptic transmission by affecting both presynaptic and postsynaptic protein expression and function
    Article Snippet: In order to overexpress CHRNA7 we used the purchased plasmid Addgene #62276. .. To generate plasmids capable of overexpressing CHRNA7 selectively in neurons, the CHRNA7 coding sequence from plasmid Addgene #62276 was amplified by PCR and inserted into two in-house pAAV2 viral backbones, containing the hSyn promoter as well as mRuby2 gene reporter, using Gibson Assembly (Gibson Assembly Master Mix, New England Biolabs, Ipswich, MA, United States). .. All restriction enzymes were purchased from New England Biolabs.

    Article Title: AAV.PHP.eB-based strategies for precise modulation of α7 nicotinic acetylcholine receptor in neurons and astrocytes in the adult mouse brain.
    Article Snippet: .. Plasmid design and viral vector assembly for CHRNA7 overexpression or silencing To generate plasmids capable of overexpressing CHRNA7 selectively in neurons and astrocytes, the CHRNA7 coding sequence from plasmid Addgene #62276 was amplified by PCR and inserted into two in-house pAAV2 viral backbones, containing the hSyn or GFAP promoters as well as mRuby2 gene reporter, using Gibson Assembly (Gibson Assembly Master Mix, New England Biolabs, Ipswich, MA, USA). pcDNA3.1-CMV-CHRNA7 was a gift from Sherry Leonard & Henry Lester (Addgene plasmid #6227611). .. All restriction enzymes were purchased from New England Biolabs.

    Article Title: Synthetic miniature Crispr-Cas (CasMINI) system for eukaryotic genome engineering
    Article Snippet: .. Specifically, the Cas14 sequence was amplified from plasmid Addgene #112500, and the dCas14 was generated by introducing two mutations (D326A and D510A) to the wild-type sequence. ..

    Amplification:

    Article Title: Non-canonical cytokinesis driven by mechanical uncoupling via nematic flows and adhesion-based invagination
    Article Snippet: .. To synthesize messenger RNA (mRNA) for the active RhoA sensor mNeonGreen-2xrGBD , the coding sequence was amplified from the plasmid Addgene#129624 with the primers: Fwd 5’-tttgcaggatcccatcgattgccaccATGGTGAGCAAGGGCGAGGA-3’ and Rev 5’-gtaatacgactcactatagttgattatgatcagTTATCTAGAG-3’ and the PCR product was inserted into a pCS2plus plasmid linearized by restriction enzymes BstBI and XbaI using Gibson Assembly Cloning Kit (New England Biolabs) following the manufacturer instructions. ..

    Article Title: Functional deletion of α7 nicotinic acetylcholine receptor impairs Ca 2+ -dependent glutamatergic synaptic transmission by affecting both presynaptic and postsynaptic protein expression and function
    Article Snippet: In order to overexpress CHRNA7 we used the purchased plasmid Addgene #62276. .. To generate plasmids capable of overexpressing CHRNA7 selectively in neurons, the CHRNA7 coding sequence from plasmid Addgene #62276 was amplified by PCR and inserted into two in-house pAAV2 viral backbones, containing the hSyn promoter as well as mRuby2 gene reporter, using Gibson Assembly (Gibson Assembly Master Mix, New England Biolabs, Ipswich, MA, United States). .. All restriction enzymes were purchased from New England Biolabs.

    Article Title: AI-driven identification of a selective dual function inhibitor blocking HK2 activity and HK2-VDAC1 interaction displaying enhanced anticancer efficacy under hypoxia.
    Article Snippet: Selective inhibition of hexokinase 2 (HK2) represents a promising therapeutic strategy due to the pivotal role of HK2 in the Warburg effect, enhancement of glycolysis and anti-apoptosis via HK2-Voltage-Dependent Anion Channel 1 (VDAC1) protein-protein interaction.. Moreover, HK2 initiates glycolysis to generate lactate, hence this central enzyme can be pharmacologically targeted to enhance therapy outcomes.. Currently, no HK2 inhibitors (HK2is) exist in the clinic.

    Article Title: AAV.PHP.eB-based strategies for precise modulation of α7 nicotinic acetylcholine receptor in neurons and astrocytes in the adult mouse brain.
    Article Snippet: .. Plasmid design and viral vector assembly for CHRNA7 overexpression or silencing To generate plasmids capable of overexpressing CHRNA7 selectively in neurons and astrocytes, the CHRNA7 coding sequence from plasmid Addgene #62276 was amplified by PCR and inserted into two in-house pAAV2 viral backbones, containing the hSyn or GFAP promoters as well as mRuby2 gene reporter, using Gibson Assembly (Gibson Assembly Master Mix, New England Biolabs, Ipswich, MA, USA). pcDNA3.1-CMV-CHRNA7 was a gift from Sherry Leonard & Henry Lester (Addgene plasmid #6227611). .. All restriction enzymes were purchased from New England Biolabs.

    Article Title: Synthetic miniature Crispr-Cas (CasMINI) system for eukaryotic genome engineering
    Article Snippet: .. Specifically, the Cas14 sequence was amplified from plasmid Addgene #112500, and the dCas14 was generated by introducing two mutations (D326A and D510A) to the wild-type sequence. ..

    Plasmid Preparation:

    Article Title: Non-canonical cytokinesis driven by mechanical uncoupling via nematic flows and adhesion-based invagination
    Article Snippet: .. To synthesize messenger RNA (mRNA) for the active RhoA sensor mNeonGreen-2xrGBD , the coding sequence was amplified from the plasmid Addgene#129624 with the primers: Fwd 5’-tttgcaggatcccatcgattgccaccATGGTGAGCAAGGGCGAGGA-3’ and Rev 5’-gtaatacgactcactatagttgattatgatcagTTATCTAGAG-3’ and the PCR product was inserted into a pCS2plus plasmid linearized by restriction enzymes BstBI and XbaI using Gibson Assembly Cloning Kit (New England Biolabs) following the manufacturer instructions. ..

    Article Title: AsCas12a tolerates insertions in target DNA
    Article Snippet: .. 120 ssDNA-0nt insert CTCTCCCAGGACACACACCT Fig. S8 121 ssDNA-2nt insert CTCTCCCAGGTTACACACACCT Fig. S8 122 ssDNA-4nt insert CTCTCCCAGGTTTTACACACACCT Fig. S8 123 ssDNA-6nt insert CTCTCCCAGGTTTTTTACACACACCT Fig. S8 124 ssDNA-8nt insert CTCTCCCAGGTTTTTTTTACACACACCT Fig. S8 125 ssDNA-10nt insert CTCTCCCAGGTTTTTTTTTTACACACACCT Fig. S7, S8 126 Supercoiled plasmid Addgene #133962 (a gift from Kleinstiver lab) Fig. S9 127 crRNA-5 nt UAAUUUCUACUAAGUGUAGAUCUCAGGGC GGGUGCUCAGGU Fig. S9 128 crRNA-10 nt UAAUUUCUACUAAGUGUAGAUCUCAGGGC GGCAGGUAGUGG Fig. S9 129 crRNA-15 nt UAAUUUCUACUAAGUGUAGAUCUCAGGGC GGAGUGGUUGUC Fig. S9 130 crRNA-CCR5-control UAAUUUCUACUCUUGUAGAUGCAGGGCUC CGAUGUAUAAUAAUU Fig. S10 131 crRNA-CCR5-1nt UAAUUUCUACUCUUGUAGAUGCAGGGCUC CGAGUAUAAUAAUUG Fig. S10 132 crRNA-CCR5-5nt UAAUUUCUACUCUUGUAGAUGCAGGGCUC CGAAAUAAUUGAUGU Fig. S10 133 crRNA-CCR5-10nt UAAUUUCUACUCUUGUAGAUGCAGGGCUC CGAUUGAUGUCAUAG Fig. S10 134 crRNA-CCR5-20nt UAAUUUCUACUCUUGUAGAUGCAGGGCUC CGAAGAUUGGACUUG Fig. S10 Supplementary Fig. S1: Insertion-length tolerance across 12 Cas12a orthologs displayed as bar graphs with error bars. ..

    Article Title: LAMP2A Regulates Endosomal Protein Composition and Membrane Identity in Exosome Biogenesis
    Article Snippet: .. REAGENT or RESOURCE SOURCE IDENTIFIER Anti-CD63 antibody SICGEN AB0047 Anti-CD63 antibody (IF) Santa Cruz Biotechnology MX-49.129.5 Anti-EEA1 antibody SICGEN AB0006-200 Anti-Rab27A antibody SICGEN AB0045 Anti-Rab27B antibody SICGEN AB0072 Anti-actin antibody Thermo Fisher MA1-744 Anti-Cathepsin B antibody Santa Cruz Biotechnology SC-6493 Anti-LAMP2A antibody Abcam AB125068 Anti-Rab7 antibody SICGEN AB0033 Anti-Rab3 antibody SICGEN AB10032 Anti-RPN1 antibody Invitrogen MA5-25710 Anti-TOMM20 antibody Abcam AB186734 Anti-Rab8 antibody SICGEN AB3176 Anti-Rab35 antibody SICGEN AB0198 Cy5 antibody Abcam AB6566 Cy3 antibody Abcam AB97035 HRP antibody Bio-Rad 170–6516 Rabbit anti-goat Bio-Rad 172–1034 Goat anti-rabbit Bio-Rad 170–6515 Pierce BCA Protein Assay Kit Thermo Fisher 23225 ARPE-19 cell line ATCC ATCC-CRL-2302 pLenti6 vector Thermo Fisher V49610 pMD2.G plasmid Addgene #12259 psPAX2 plasmid Addgene # 12260 GFP-P4M-SidMx2 plasmid Gift from Garcia-Gonzalo Addgene #51472 RFP-C1-PLCdelta-PH plasmid Addgene #21179 BP/LR Clonase II kit Thermo Fisher 11789013/11791019 pHrodo Dextran probe Thermo Fisher P10361 LysoSensor probe Thermo Fisher L7535 Sir-Lysosome Cathepsin D probe Spirochrome AG SC012 Phalloidin (actin staining) Thermo Fisher A22281 Lentiviral particle production system N/A N/A LC-MS/MS proteomics data This paper and Ferreira et al. (17) PRIDE accession PXD070994 GraphPad Prism 10.0 GraphPad Software RRID:SCR_002798 Cytoscape 3.10.0 Cytoscape Consortium RRID:SCR_003032 STRING app v2.0.1 STRING Consortium RRID:SCR_005223 ClueGO v2.5.10 Bindea Lab RRID:SCR_005748 Enrichr online tool Ma’ayan Lab RRID:SCR_001575 DMEM with Glutamine Biowest L0102 Fetal Bovine Serum Biowest S1810 Penicillin-Streptomycin Gibco 15140122 Nitrocellulose Membrane GE Healthcare 88018 ECL GE Healthcare RPN 1235 Epon resin EMbed 812 e1 iScience 29, 114305, January 16, 2026 .. ARPE-19 human cell lines (originally derived from retinal pigment epithelium human male) were cultured in Dulbecco’s modified Eagle’s medium (DMEM) with glutamine (Biowest).

    Article Title: Functional deletion of α7 nicotinic acetylcholine receptor impairs Ca 2+ -dependent glutamatergic synaptic transmission by affecting both presynaptic and postsynaptic protein expression and function
    Article Snippet: In order to overexpress CHRNA7 we used the purchased plasmid Addgene #62276. .. To generate plasmids capable of overexpressing CHRNA7 selectively in neurons, the CHRNA7 coding sequence from plasmid Addgene #62276 was amplified by PCR and inserted into two in-house pAAV2 viral backbones, containing the hSyn promoter as well as mRuby2 gene reporter, using Gibson Assembly (Gibson Assembly Master Mix, New England Biolabs, Ipswich, MA, United States). .. All restriction enzymes were purchased from New England Biolabs.

    Article Title: AI-driven identification of a selective dual function inhibitor blocking HK2 activity and HK2-VDAC1 interaction displaying enhanced anticancer efficacy under hypoxia.
    Article Snippet: Selective inhibition of hexokinase 2 (HK2) represents a promising therapeutic strategy due to the pivotal role of HK2 in the Warburg effect, enhancement of glycolysis and anti-apoptosis via HK2-Voltage-Dependent Anion Channel 1 (VDAC1) protein-protein interaction.. Moreover, HK2 initiates glycolysis to generate lactate, hence this central enzyme can be pharmacologically targeted to enhance therapy outcomes.. Currently, no HK2 inhibitors (HK2is) exist in the clinic.

    Article Title: AAV.PHP.eB-based strategies for precise modulation of α7 nicotinic acetylcholine receptor in neurons and astrocytes in the adult mouse brain.
    Article Snippet: .. Plasmid design and viral vector assembly for CHRNA7 overexpression or silencing To generate plasmids capable of overexpressing CHRNA7 selectively in neurons and astrocytes, the CHRNA7 coding sequence from plasmid Addgene #62276 was amplified by PCR and inserted into two in-house pAAV2 viral backbones, containing the hSyn or GFAP promoters as well as mRuby2 gene reporter, using Gibson Assembly (Gibson Assembly Master Mix, New England Biolabs, Ipswich, MA, USA). pcDNA3.1-CMV-CHRNA7 was a gift from Sherry Leonard & Henry Lester (Addgene plasmid #6227611). .. All restriction enzymes were purchased from New England Biolabs.

    Article Title: Synthetic miniature Crispr-Cas (CasMINI) system for eukaryotic genome engineering
    Article Snippet: .. Specifically, the Cas14 sequence was amplified from plasmid Addgene #112500, and the dCas14 was generated by introducing two mutations (D326A and D510A) to the wild-type sequence. ..

    Article Title: Dopaminergic Modulation of Striatal Somatostatin Interneurons Shapes Motor Learning and L-DOPA-Induced Dyskinesia.
    Article Snippet: Somatostatin-expressing low-threshold spiking interneurons (SOM-INs) constitute a key inhibitory population in the dorsal striatum, yet their contribution to parkinsonian states and L-DOPA-induced dyskinesia (LID) remains poorly understood.. Here, we combined in vivo behavioral assays, chemogenetics, and ex vivo electrophysiology to examine how nigrostriatal dopamine loss and dopaminergic therapy shape SOM-INs’ activity and function.. During LID, SOM-INs displayed increased c-Fos expression, revealing their recruitment during dyskinetic states.

    Polymerase Chain Reaction:

    Article Title: Non-canonical cytokinesis driven by mechanical uncoupling via nematic flows and adhesion-based invagination
    Article Snippet: .. To synthesize messenger RNA (mRNA) for the active RhoA sensor mNeonGreen-2xrGBD , the coding sequence was amplified from the plasmid Addgene#129624 with the primers: Fwd 5’-tttgcaggatcccatcgattgccaccATGGTGAGCAAGGGCGAGGA-3’ and Rev 5’-gtaatacgactcactatagttgattatgatcagTTATCTAGAG-3’ and the PCR product was inserted into a pCS2plus plasmid linearized by restriction enzymes BstBI and XbaI using Gibson Assembly Cloning Kit (New England Biolabs) following the manufacturer instructions. ..

    Article Title: Functional deletion of α7 nicotinic acetylcholine receptor impairs Ca 2+ -dependent glutamatergic synaptic transmission by affecting both presynaptic and postsynaptic protein expression and function
    Article Snippet: In order to overexpress CHRNA7 we used the purchased plasmid Addgene #62276. .. To generate plasmids capable of overexpressing CHRNA7 selectively in neurons, the CHRNA7 coding sequence from plasmid Addgene #62276 was amplified by PCR and inserted into two in-house pAAV2 viral backbones, containing the hSyn promoter as well as mRuby2 gene reporter, using Gibson Assembly (Gibson Assembly Master Mix, New England Biolabs, Ipswich, MA, United States). .. All restriction enzymes were purchased from New England Biolabs.

    Article Title: AI-driven identification of a selective dual function inhibitor blocking HK2 activity and HK2-VDAC1 interaction displaying enhanced anticancer efficacy under hypoxia.
    Article Snippet: Selective inhibition of hexokinase 2 (HK2) represents a promising therapeutic strategy due to the pivotal role of HK2 in the Warburg effect, enhancement of glycolysis and anti-apoptosis via HK2-Voltage-Dependent Anion Channel 1 (VDAC1) protein-protein interaction.. Moreover, HK2 initiates glycolysis to generate lactate, hence this central enzyme can be pharmacologically targeted to enhance therapy outcomes.. Currently, no HK2 inhibitors (HK2is) exist in the clinic.

    Article Title: AAV.PHP.eB-based strategies for precise modulation of α7 nicotinic acetylcholine receptor in neurons and astrocytes in the adult mouse brain.
    Article Snippet: .. Plasmid design and viral vector assembly for CHRNA7 overexpression or silencing To generate plasmids capable of overexpressing CHRNA7 selectively in neurons and astrocytes, the CHRNA7 coding sequence from plasmid Addgene #62276 was amplified by PCR and inserted into two in-house pAAV2 viral backbones, containing the hSyn or GFAP promoters as well as mRuby2 gene reporter, using Gibson Assembly (Gibson Assembly Master Mix, New England Biolabs, Ipswich, MA, USA). pcDNA3.1-CMV-CHRNA7 was a gift from Sherry Leonard & Henry Lester (Addgene plasmid #6227611). .. All restriction enzymes were purchased from New England Biolabs.

    Cloning:

    Article Title: Non-canonical cytokinesis driven by mechanical uncoupling via nematic flows and adhesion-based invagination
    Article Snippet: .. To synthesize messenger RNA (mRNA) for the active RhoA sensor mNeonGreen-2xrGBD , the coding sequence was amplified from the plasmid Addgene#129624 with the primers: Fwd 5’-tttgcaggatcccatcgattgccaccATGGTGAGCAAGGGCGAGGA-3’ and Rev 5’-gtaatacgactcactatagttgattatgatcagTTATCTAGAG-3’ and the PCR product was inserted into a pCS2plus plasmid linearized by restriction enzymes BstBI and XbaI using Gibson Assembly Cloning Kit (New England Biolabs) following the manufacturer instructions. ..

    Bicinchoninic Acid Protein Assay:

    Article Title: LAMP2A Regulates Endosomal Protein Composition and Membrane Identity in Exosome Biogenesis
    Article Snippet: .. REAGENT or RESOURCE SOURCE IDENTIFIER Anti-CD63 antibody SICGEN AB0047 Anti-CD63 antibody (IF) Santa Cruz Biotechnology MX-49.129.5 Anti-EEA1 antibody SICGEN AB0006-200 Anti-Rab27A antibody SICGEN AB0045 Anti-Rab27B antibody SICGEN AB0072 Anti-actin antibody Thermo Fisher MA1-744 Anti-Cathepsin B antibody Santa Cruz Biotechnology SC-6493 Anti-LAMP2A antibody Abcam AB125068 Anti-Rab7 antibody SICGEN AB0033 Anti-Rab3 antibody SICGEN AB10032 Anti-RPN1 antibody Invitrogen MA5-25710 Anti-TOMM20 antibody Abcam AB186734 Anti-Rab8 antibody SICGEN AB3176 Anti-Rab35 antibody SICGEN AB0198 Cy5 antibody Abcam AB6566 Cy3 antibody Abcam AB97035 HRP antibody Bio-Rad 170–6516 Rabbit anti-goat Bio-Rad 172–1034 Goat anti-rabbit Bio-Rad 170–6515 Pierce BCA Protein Assay Kit Thermo Fisher 23225 ARPE-19 cell line ATCC ATCC-CRL-2302 pLenti6 vector Thermo Fisher V49610 pMD2.G plasmid Addgene #12259 psPAX2 plasmid Addgene # 12260 GFP-P4M-SidMx2 plasmid Gift from Garcia-Gonzalo Addgene #51472 RFP-C1-PLCdelta-PH plasmid Addgene #21179 BP/LR Clonase II kit Thermo Fisher 11789013/11791019 pHrodo Dextran probe Thermo Fisher P10361 LysoSensor probe Thermo Fisher L7535 Sir-Lysosome Cathepsin D probe Spirochrome AG SC012 Phalloidin (actin staining) Thermo Fisher A22281 Lentiviral particle production system N/A N/A LC-MS/MS proteomics data This paper and Ferreira et al. (17) PRIDE accession PXD070994 GraphPad Prism 10.0 GraphPad Software RRID:SCR_002798 Cytoscape 3.10.0 Cytoscape Consortium RRID:SCR_003032 STRING app v2.0.1 STRING Consortium RRID:SCR_005223 ClueGO v2.5.10 Bindea Lab RRID:SCR_005748 Enrichr online tool Ma’ayan Lab RRID:SCR_001575 DMEM with Glutamine Biowest L0102 Fetal Bovine Serum Biowest S1810 Penicillin-Streptomycin Gibco 15140122 Nitrocellulose Membrane GE Healthcare 88018 ECL GE Healthcare RPN 1235 Epon resin EMbed 812 e1 iScience 29, 114305, January 16, 2026 .. ARPE-19 human cell lines (originally derived from retinal pigment epithelium human male) were cultured in Dulbecco’s modified Eagle’s medium (DMEM) with glutamine (Biowest).

    Staining:

    Article Title: LAMP2A Regulates Endosomal Protein Composition and Membrane Identity in Exosome Biogenesis
    Article Snippet: .. REAGENT or RESOURCE SOURCE IDENTIFIER Anti-CD63 antibody SICGEN AB0047 Anti-CD63 antibody (IF) Santa Cruz Biotechnology MX-49.129.5 Anti-EEA1 antibody SICGEN AB0006-200 Anti-Rab27A antibody SICGEN AB0045 Anti-Rab27B antibody SICGEN AB0072 Anti-actin antibody Thermo Fisher MA1-744 Anti-Cathepsin B antibody Santa Cruz Biotechnology SC-6493 Anti-LAMP2A antibody Abcam AB125068 Anti-Rab7 antibody SICGEN AB0033 Anti-Rab3 antibody SICGEN AB10032 Anti-RPN1 antibody Invitrogen MA5-25710 Anti-TOMM20 antibody Abcam AB186734 Anti-Rab8 antibody SICGEN AB3176 Anti-Rab35 antibody SICGEN AB0198 Cy5 antibody Abcam AB6566 Cy3 antibody Abcam AB97035 HRP antibody Bio-Rad 170–6516 Rabbit anti-goat Bio-Rad 172–1034 Goat anti-rabbit Bio-Rad 170–6515 Pierce BCA Protein Assay Kit Thermo Fisher 23225 ARPE-19 cell line ATCC ATCC-CRL-2302 pLenti6 vector Thermo Fisher V49610 pMD2.G plasmid Addgene #12259 psPAX2 plasmid Addgene # 12260 GFP-P4M-SidMx2 plasmid Gift from Garcia-Gonzalo Addgene #51472 RFP-C1-PLCdelta-PH plasmid Addgene #21179 BP/LR Clonase II kit Thermo Fisher 11789013/11791019 pHrodo Dextran probe Thermo Fisher P10361 LysoSensor probe Thermo Fisher L7535 Sir-Lysosome Cathepsin D probe Spirochrome AG SC012 Phalloidin (actin staining) Thermo Fisher A22281 Lentiviral particle production system N/A N/A LC-MS/MS proteomics data This paper and Ferreira et al. (17) PRIDE accession PXD070994 GraphPad Prism 10.0 GraphPad Software RRID:SCR_002798 Cytoscape 3.10.0 Cytoscape Consortium RRID:SCR_003032 STRING app v2.0.1 STRING Consortium RRID:SCR_005223 ClueGO v2.5.10 Bindea Lab RRID:SCR_005748 Enrichr online tool Ma’ayan Lab RRID:SCR_001575 DMEM with Glutamine Biowest L0102 Fetal Bovine Serum Biowest S1810 Penicillin-Streptomycin Gibco 15140122 Nitrocellulose Membrane GE Healthcare 88018 ECL GE Healthcare RPN 1235 Epon resin EMbed 812 e1 iScience 29, 114305, January 16, 2026 .. ARPE-19 human cell lines (originally derived from retinal pigment epithelium human male) were cultured in Dulbecco’s modified Eagle’s medium (DMEM) with glutamine (Biowest).

    Membrane:

    Article Title: LAMP2A Regulates Endosomal Protein Composition and Membrane Identity in Exosome Biogenesis
    Article Snippet: .. REAGENT or RESOURCE SOURCE IDENTIFIER Anti-CD63 antibody SICGEN AB0047 Anti-CD63 antibody (IF) Santa Cruz Biotechnology MX-49.129.5 Anti-EEA1 antibody SICGEN AB0006-200 Anti-Rab27A antibody SICGEN AB0045 Anti-Rab27B antibody SICGEN AB0072 Anti-actin antibody Thermo Fisher MA1-744 Anti-Cathepsin B antibody Santa Cruz Biotechnology SC-6493 Anti-LAMP2A antibody Abcam AB125068 Anti-Rab7 antibody SICGEN AB0033 Anti-Rab3 antibody SICGEN AB10032 Anti-RPN1 antibody Invitrogen MA5-25710 Anti-TOMM20 antibody Abcam AB186734 Anti-Rab8 antibody SICGEN AB3176 Anti-Rab35 antibody SICGEN AB0198 Cy5 antibody Abcam AB6566 Cy3 antibody Abcam AB97035 HRP antibody Bio-Rad 170–6516 Rabbit anti-goat Bio-Rad 172–1034 Goat anti-rabbit Bio-Rad 170–6515 Pierce BCA Protein Assay Kit Thermo Fisher 23225 ARPE-19 cell line ATCC ATCC-CRL-2302 pLenti6 vector Thermo Fisher V49610 pMD2.G plasmid Addgene #12259 psPAX2 plasmid Addgene # 12260 GFP-P4M-SidMx2 plasmid Gift from Garcia-Gonzalo Addgene #51472 RFP-C1-PLCdelta-PH plasmid Addgene #21179 BP/LR Clonase II kit Thermo Fisher 11789013/11791019 pHrodo Dextran probe Thermo Fisher P10361 LysoSensor probe Thermo Fisher L7535 Sir-Lysosome Cathepsin D probe Spirochrome AG SC012 Phalloidin (actin staining) Thermo Fisher A22281 Lentiviral particle production system N/A N/A LC-MS/MS proteomics data This paper and Ferreira et al. (17) PRIDE accession PXD070994 GraphPad Prism 10.0 GraphPad Software RRID:SCR_002798 Cytoscape 3.10.0 Cytoscape Consortium RRID:SCR_003032 STRING app v2.0.1 STRING Consortium RRID:SCR_005223 ClueGO v2.5.10 Bindea Lab RRID:SCR_005748 Enrichr online tool Ma’ayan Lab RRID:SCR_001575 DMEM with Glutamine Biowest L0102 Fetal Bovine Serum Biowest S1810 Penicillin-Streptomycin Gibco 15140122 Nitrocellulose Membrane GE Healthcare 88018 ECL GE Healthcare RPN 1235 Epon resin EMbed 812 e1 iScience 29, 114305, January 16, 2026 .. ARPE-19 human cell lines (originally derived from retinal pigment epithelium human male) were cultured in Dulbecco’s modified Eagle’s medium (DMEM) with glutamine (Biowest).

    Derivative Assay:

    Article Title: AI-driven identification of a selective dual function inhibitor blocking HK2 activity and HK2-VDAC1 interaction displaying enhanced anticancer efficacy under hypoxia.
    Article Snippet: Selective inhibition of hexokinase 2 (HK2) represents a promising therapeutic strategy due to the pivotal role of HK2 in the Warburg effect, enhancement of glycolysis and anti-apoptosis via HK2-Voltage-Dependent Anion Channel 1 (VDAC1) protein-protein interaction.. Moreover, HK2 initiates glycolysis to generate lactate, hence this central enzyme can be pharmacologically targeted to enhance therapy outcomes.. Currently, no HK2 inhibitors (HK2is) exist in the clinic.

    Over Expression:

    Article Title: AAV.PHP.eB-based strategies for precise modulation of α7 nicotinic acetylcholine receptor in neurons and astrocytes in the adult mouse brain.
    Article Snippet: .. Plasmid design and viral vector assembly for CHRNA7 overexpression or silencing To generate plasmids capable of overexpressing CHRNA7 selectively in neurons and astrocytes, the CHRNA7 coding sequence from plasmid Addgene #62276 was amplified by PCR and inserted into two in-house pAAV2 viral backbones, containing the hSyn or GFAP promoters as well as mRuby2 gene reporter, using Gibson Assembly (Gibson Assembly Master Mix, New England Biolabs, Ipswich, MA, USA). pcDNA3.1-CMV-CHRNA7 was a gift from Sherry Leonard & Henry Lester (Addgene plasmid #6227611). .. All restriction enzymes were purchased from New England Biolabs.

    Generated:

    Article Title: Synthetic miniature Crispr-Cas (CasMINI) system for eukaryotic genome engineering
    Article Snippet: .. Specifically, the Cas14 sequence was amplified from plasmid Addgene #112500, and the dCas14 was generated by introducing two mutations (D326A and D510A) to the wild-type sequence. ..

    Expressing:

    Article Title: Dopaminergic Modulation of Striatal Somatostatin Interneurons Shapes Motor Learning and L-DOPA-Induced Dyskinesia.
    Article Snippet: Somatostatin-expressing low-threshold spiking interneurons (SOM-INs) constitute a key inhibitory population in the dorsal striatum, yet their contribution to parkinsonian states and L-DOPA-induced dyskinesia (LID) remains poorly understood.. Here, we combined in vivo behavioral assays, chemogenetics, and ex vivo electrophysiology to examine how nigrostriatal dopamine loss and dopaminergic therapy shape SOM-INs’ activity and function.. During LID, SOM-INs displayed increased c-Fos expression, revealing their recruitment during dyskinetic states.



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